PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.FPU47
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 341aa    MW: 38454.3 Da    PI: 4.8018
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.FPU47genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.4e-12181224654
                  HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                   ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  Aradu.FPU47 181 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 224
                  589*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.491175224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.41E-15177239IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-12181230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-9181224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.01E-4182229No hitNo description
Gene3DG3DSA:4.10.280.101.1E-14182238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00305267308No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MELSQLGFLE ELLLLAPRRV EETCWNNGFN DLLPTTPPPS ASVSASWSFD SLDDNPSLNP  60
SFSSFSTPLD HRFDSSYAAS FPFLDAFTIP PELHHSPPPL LPQQEHNHNN HHPLVEEEEE  120
ELGFLGNDDN NQSLEERNSG RCKVEEQQAL EVPAVVFNMG MCGEKKVPKS KKLEGQPSKN  180
LMAERRRRKR LNDRLSMLRS IVPKISKMDR TSILGDTIDY MKELLERIAK LQEETMEEEG  240
KNQIHLLGIS KELKPNEFDV ERRDHDTRIS ICCATKPGLL LSTVNTLEAL GLEIHQCVIS  300
GFNDFSMQAS CSEVAEERNC ISTEDVKQAL FKNAGYGGRC V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1183190ERRRRKRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015963319.10.0PREDICTED: transcription factor bHLH93-like
SwissprotQ9LSL14e-81BH093_ARATH; Transcription factor bHLH93
TrEMBLA0A0B2PBB41e-146A0A0B2PBB4_GLYSO; Transcription factor bHLH93
TrEMBLI1J4X01e-146I1J4X0_SOYBN; BHLH transcription factor
STRINGGLYMA01G02390.11e-146(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118634103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.12e-81beta HLH protein 93